Install the Certificate in Server 2008 r2 (Without IIS)

1. Download your signed certificated from the UW Certificate Services tool.  For details on this process see UW Certificate Services.  
2. Log in as an administrator
3. From a command prompt or the run menu:
   1. To create the certificate in the local machine store (recommended):
      
      1. Type mmc
      2. On the File menu, click Add/Remove Snap-in.  Click Certificates in the left pane, then click Add.  
      3. Select Computer Account, then click Next.
      4. Select Local Computer, then click Finish.  
      5. Click OK.  
   2. To create the certificate in the logged on user's personal store:
      1. Type certmgr.msc
4. In the left pane expand Certificates (Local Computer), expand  Personal, then click Certificates.  
5. On the Action menu, click All Tasks, then click Import.
6. Click Next.   On Windows Server 2012 this screen presents an option to "select" a certificate store, but the correct store is already selected, and you can't change it.  
7. Select the signed certificate you downloaded in Step 1.  Click Next.  
8. Select Place all certificates in the following store.  Under Certificate Store, make sure Personal is selected.  Click Next.  
9. Verify the information on the screen and click Finish.